feat: prepare EvoScientist 0.3.0

Add bounded document ingestion, controlled web search, recoverable session support, subagent timeouts, and the native sandbox runtime contract. Unify package versioning and add release-focused regression coverage.

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "EvoScientist"
-version = "0.2.2"
+dynamic = ["version"]
 description = "EvoScientist: Towards Self-Evolving AI Scientists for End-to-End Scientific Discovery"
 readme = "README.md"
 requires-python = ">=3.11"
@@ -17,6 +17,8 @@ classifiers = [
 ]
 dependencies = [
     "deepagents[quickjs]~=0.6.12",
+    "firecrawl-anydoc>=0.1.6,<0.2",
+    "pillow>=10.0",
     "langchain>=1.3",
     "langchain-anthropic>=1.4",
     "langchain-openai>=1.2",
@@ -111,6 +113,9 @@ build-backend = "setuptools.build_meta"
 [tool.setuptools.packages.find]
 include = ["EvoScientist*"]
 
+[tool.setuptools.dynamic]
+version = { attr = "EvoScientist._version.__version__" }
+
 [tool.setuptools.package-data]
 EvoScientist = [
     "subagents/*.yaml",
@@ -118,6 +123,9 @@ EvoScientist = [
     "skills/**/*",
 ]
 
+[tool.setuptools.exclude-package-data]
+"*" = ["**/__pycache__/*", "**/*.pyc", "**/*.pyo"]
+
 [tool.pytest.ini_options]
 testpaths = ["tests"]
 asyncio_mode = "auto"