Files
EvoScientist-Multi/EvoScientist/backends.py
T
X-iZhang c5a4d559a2 Refactor test cases for improved readability and consistency
- Added blank lines for better separation of test cases in multiple test files.
- Reformatted event handling in tests for clarity and consistency.
- Ensured consistent use of multi-line formatting for dictionary arguments in event handling.
- Improved assertions and test descriptions for better understanding.
- Updated test cases across various modules including test_stream_state, test_stream_utils, test_summarization, test_thread_selector, test_tool_error_handler, test_tui_widgets, test_ui_runtime, and test_wechat_channel.
2026-03-15 21:12:51 +00:00

446 lines
15 KiB
Python

"""Custom backends for EvoScientist agent."""
import os
import re
import shlex
import uuid
from pathlib import Path
from deepagents.backends import FilesystemBackend, LocalShellBackend
from deepagents.backends.protocol import (
BackendProtocol,
EditResult,
ExecuteResponse,
FileDownloadResponse,
FileUploadResponse,
WriteResult,
)
# System path prefixes that should never appear in virtual paths.
# If the agent hallucinates an absolute system path, we block it.
_SYSTEM_PATH_PREFIXES = (
"/Users/",
"/home/",
"/tmp/",
"/var/",
"/etc/",
"/opt/",
"/usr/",
"/bin/",
"/sbin/",
"/dev/",
"/proc/",
"/sys/",
"/root/",
)
# Dangerous patterns that could escape the workspace
BLOCKED_PATTERNS = [
r"~/", # home directory
r"\bcd\s+/", # cd to absolute path
r"\brm\s+-rf\s+/", # rm -rf with absolute path
]
# Dangerous commands that should never be executed
BLOCKED_COMMANDS = [
"sudo",
"chmod",
"chown",
"mkfs",
"dd",
"shutdown",
"reboot",
]
def _split_shell_commands(command: str) -> list[str]:
"""Split a compound shell command into individual base commands.
Handles &&, ||, ;, and | operators. Returns base command names.
"""
base_commands: list[str] = []
# Split by sequential operators first
for segment in re.split(r"\s*(?:&&|\|\||;)\s*", command):
# Then split by pipe
for pipe_seg in segment.split("|"):
pipe_seg = pipe_seg.strip()
if not pipe_seg:
continue
try:
tokens = shlex.split(pipe_seg)
except ValueError:
tokens = pipe_seg.split()
if tokens:
base_commands.append(tokens[0])
return base_commands
def _has_traversal_component(command: str) -> bool:
"""Check if command contains '..' as a path component (not substring)."""
from pathlib import PurePosixPath
for token in command.split():
if ".." in PurePosixPath(token).parts:
return True
return False
def validate_command(command: str) -> str | None:
"""
Validate a shell command for safety.
Returns:
None if command is safe, error message string if blocked.
"""
# Check for '..' path traversal as a path component
if _has_traversal_component(command):
return (
"Command blocked: contains '..' path traversal. "
"All commands must operate within the workspace directory. "
"Use relative paths (e.g., './file.py') instead."
)
# Check for dangerous patterns
for pattern in BLOCKED_PATTERNS:
if re.search(pattern, command):
return (
f"Command blocked: contains forbidden pattern '{pattern}'. "
f"All commands must operate within the workspace directory. "
f"Use relative paths (e.g., './file.py') instead."
)
# Check for dangerous commands (pipeline-aware)
for base_cmd in _split_shell_commands(command):
if base_cmd in BLOCKED_COMMANDS:
return (
f"Command blocked: '{base_cmd}' is not allowed in sandbox mode. "
f"Only standard development commands are permitted."
)
return None
def convert_virtual_paths_in_command(
command: str,
workspace_name: str | None = None,
) -> str:
"""
Convert virtual paths (starting with /) in commands to relative paths.
Also auto-corrects hallucinated system absolute paths that reference the
workspace directory (e.g. ``/Users/.../myproject/file.py`` → ``./file.py``).
Args:
command: Original command.
workspace_name: Basename of the workspace directory (e.g. ``"workspace"``,
``"my-project"``). When provided, system paths containing
``/<workspace_name>/`` are auto-corrected.
Examples:
>>> convert_virtual_paths_in_command("python /main.py")
'python ./main.py'
>>> convert_virtual_paths_in_command("ls /")
'ls .'
>>> convert_virtual_paths_in_command(
... "mkdir -p /Users/u/proj/dir", workspace_name="proj")
'mkdir -p ./dir'
"""
def replace_virtual_path(match: re.Match[str]) -> str:
path = match.group(0)
# Skip content that looks like a URL
if "://" in command[max(0, match.start() - 10) : match.end() + 10]:
return path
# Fix hallucinated system absolute paths that reference the workspace.
# E.g. /Users/user/.../myproject/file.py → ./file.py
# This mirrors _resolve_path() logic but for shell command strings.
if workspace_name:
for prefix in _SYSTEM_PATH_PREFIXES:
if path.startswith(prefix):
marker = f"/{workspace_name}/"
idx = path.find(marker)
if idx != -1:
relative = path[idx + len(marker) :]
return "./" + relative if relative else "."
elif path.endswith(f"/{workspace_name}"):
return "."
break # Matched system prefix but no workspace → fall through
# Convert virtual path
if path == "/":
return "."
else:
return "." + path
# Match pattern: paths starting with / (but not URLs)
pattern = r'(?<=\s)/[^\s;|&<>\'"`]*|^/[^\s;|&<>\'"`]*'
converted = re.sub(pattern, replace_virtual_path, command)
return converted
class ReadOnlyFilesystemBackend(FilesystemBackend):
"""
Read-only filesystem backend.
Allows read, ls, grep, glob operations but blocks write and edit.
Used for skills directory — agent can read skill definitions but cannot
modify them.
"""
def write(self, file_path: str, content: str) -> WriteResult:
return WriteResult(
error="This directory is read-only. Write operations are not permitted here."
)
def edit(
self,
file_path: str,
old_string: str,
new_string: str,
replace_all: bool = False,
) -> EditResult:
return EditResult(
error="This directory is read-only. Edit operations are not permitted here."
)
class MergedReadOnlyBackend(BackendProtocol):
"""Read-only backend that merges two directories.
Reads from *primary* first (user skills in workspace/skills/),
falls back to *secondary* (system skills in ./skills/).
User skills override system skills with the same name.
Both directories share the same virtual path namespace — the agent
sees all skills under /skills/ regardless of which backend serves them.
"""
def __init__(self, primary_dir: str, secondary_dir: str):
self._primary = ReadOnlyFilesystemBackend(
root_dir=primary_dir, virtual_mode=True
)
self._secondary = ReadOnlyFilesystemBackend(
root_dir=secondary_dir, virtual_mode=True
)
# -- read: try primary first, fall back to secondary --
def read(self, file_path: str, offset: int = 0, limit: int = 2000) -> str:
try:
result = self._primary.read(file_path, offset, limit)
if not result.startswith("Error:"):
return result
except (ValueError, FileNotFoundError, OSError):
pass
return self._secondary.read(file_path, offset, limit)
# -- ls_info: merge both, primary wins on name conflicts --
def ls_info(self, path: str = "/") -> list:
secondary_items = {item["path"]: item for item in self._secondary.ls_info(path)}
primary_items = {item["path"]: item for item in self._primary.ls_info(path)}
secondary_items.update(primary_items) # primary overrides
return sorted(secondary_items.values(), key=lambda x: x["path"])
# -- grep_raw: search both, deduplicate --
def grep_raw(
self, pattern: str, path: str | None = None, glob: str | None = None
) -> list:
results = self._secondary.grep_raw(pattern, path, glob)
try:
results += self._primary.grep_raw(pattern, path, glob)
except Exception:
pass
return results
# -- glob_info: merge both --
def glob_info(self, pattern: str, path: str = "/") -> list:
secondary = {
item["path"]: item for item in self._secondary.glob_info(pattern, path)
}
try:
primary = {
item["path"]: item for item in self._primary.glob_info(pattern, path)
}
secondary.update(primary)
except Exception:
pass
return sorted(secondary.values(), key=lambda x: x["path"])
# -- write / edit: blocked --
def write(self, file_path: str, content: str) -> WriteResult:
return WriteResult(
error="This directory is read-only. Write operations are not permitted here."
)
def edit(
self,
file_path: str,
old_string: str,
new_string: str,
replace_all: bool = False,
) -> EditResult:
return EditResult(
error="This directory is read-only. Edit operations are not permitted here."
)
# -- download / upload --
def download_files(self, paths: list[str]) -> list[FileDownloadResponse]:
"""Download files, trying primary then secondary."""
responses: list[FileDownloadResponse] = []
for path in paths:
resp = self._primary.download_files([path])[0]
if resp.error is not None:
resp = self._secondary.download_files([path])[0]
responses.append(resp)
return responses
def upload_files(self, files: list[tuple[str, bytes]]) -> list[FileUploadResponse]:
return [
FileUploadResponse(path=path, error="permission_denied")
for path, _ in files
]
class CustomSandboxBackend(LocalShellBackend):
"""
Custom sandbox backend - inherits LocalShellBackend with added safety.
Features:
- Inherits all file operations (ls, read, write, edit, grep, glob)
- Inherits shell command execution with output truncation and timeout
- Adds command validation to prevent directory traversal and dangerous operations
- Adds path sanitization to auto-correct common LLM path mistakes
- Compatible with LangGraph checkpointer (no thread locks)
"""
def __init__(
self,
root_dir: str = ".",
*,
virtual_mode: bool = True,
timeout: int = 300,
max_output_bytes: int = 100_000,
env: dict[str, str] | None = None,
inherit_env: bool = True,
):
"""
Initialize custom sandbox backend.
Args:
root_dir: File system root directory
virtual_mode: Whether to enable virtual path mode
timeout: Command execution timeout in seconds
max_output_bytes: Max output size before truncation (default 100KB)
env: Extra environment variables for subprocess
inherit_env: Whether to inherit parent process env (default True)
"""
super().__init__(
root_dir=root_dir,
virtual_mode=virtual_mode,
timeout=timeout,
max_output_bytes=max_output_bytes,
env=env,
inherit_env=inherit_env,
)
# Override parent's "local-" prefix with our own
self._sandbox_id = f"evosci-{uuid.uuid4().hex[:8]}"
# Ensure working directory exists
os.makedirs(str(self.cwd), exist_ok=True)
def _resolve_path(self, key: str) -> Path:
"""Resolve path with sanitization to prevent nested directories.
Intercepts all file operations (read, write, edit, ls, grep, glob).
Auto-corrects common LLM path mistakes instead of crashing:
1. /<ws_name>/file.py → /file.py
2. /Users/name/.../<ws_name>/f → /f (strip up to ws dir)
3. /Users/name/file.py → /file.py (keep basename)
"""
ws_name = Path(str(self.cwd)).name # e.g. "workspace", "my-project"
# Auto-strip /<ws_name>/ prefix to prevent nesting
ws_prefix = f"/{ws_name}/"
if key.startswith(ws_prefix):
key = key[len(ws_prefix) - 1 :] # "/<ws>/main.py" → "/main.py"
elif key == f"/{ws_name}":
key = "/"
# Auto-correct system absolute paths
for prefix in _SYSTEM_PATH_PREFIXES:
if key.startswith(prefix):
# Try to extract path after "<ws_name>/"
idx = key.find(ws_prefix)
if idx != -1:
key = "/" + key[idx + len(ws_prefix) :]
elif key.endswith(f"/{ws_name}"):
key = "/"
else:
# Fall back to basename
key = "/" + Path(key).name
break
return super()._resolve_path(key)
def execute(self, command: str, *, timeout: int | None = None) -> ExecuteResponse:
"""
Execute shell command in sandbox environment.
Commands are validated before execution to prevent:
- Directory traversal (../)
- Access to paths outside workspace
- Dangerous system commands
Then delegates to LocalShellBackend.execute() for actual execution.
"""
# Validate command safety
error = validate_command(command)
if error:
return ExecuteResponse(
output=error,
exit_code=1,
truncated=False,
)
# Replace literal workspace-root absolute paths with ./
# Catches cases where the agent uses the exact real path.
ws = str(self.cwd).rstrip("/") + "/"
if ws in command:
command = command.replace(ws, "./")
# Convert virtual paths to relative paths
if self.virtual_mode:
command = convert_virtual_paths_in_command(
command=command,
workspace_name=Path(str(self.cwd)).name,
)
# Delegate to parent for subprocess execution
response = super().execute(command, timeout=timeout)
# Enhance timeout errors with actionable recovery guidance
if response.exit_code == 124:
cmd_words = command.split()
grep_hint = cmd_words[0] if cmd_words else "process"
bg_cmd = f"{command} > /output.log 2>&1 &"
response = ExecuteResponse(
output=(
f"{response.output}\n\n"
f"Recovery: re-run in background to avoid the sandbox timeout:\n"
f" {bg_cmd}\n"
f"Then check progress: ps aux | grep {grep_hint}\n"
f"Read results: cat /output.log"
),
exit_code=response.exit_code,
truncated=response.truncated,
)
return response