* feat(dangerous-mode): implement real-filesystem access with safety checks
- Introduced a 'dangerous mode' allowing the agent to operate on the real filesystem.
- Updated command validation to bypass path confinement while enforcing a blocklist for privileged commands.
- Added warnings and guidelines for users when operating in dangerous mode.
- Enhanced configuration to support dangerous mode and ensure it implies auto-approval.
- Updated tests to verify the behavior of commands and configurations in dangerous mode.
* feat(dangerous-mode): enhance logging and environment management for dangerous mode
* feat(dangerous-mode): improve handling of dangerous mode with environment flags and enhance test isolation
* feat(deploy): implement standalone LangGraph server and CLI command for deployment
* feat(deploy): enhance port validation and environment variable management for deployment
* Refactor langgraph dev deployment and introduce workspace sidecar protocol
- Updated the deployment mode handling in `server.py` to use a single environment variable `EVOSCIENTIST_DEPLOY_MODE` with values `full` and `stripped`.
- Enhanced the `manager.py` to implement a workspace fingerprint sidecar, allowing cross-process reuse of langgraph dev instances while ensuring workspace consistency.
- Introduced functions to write and read the workspace sidecar, with error handling for missing or corrupt data.
- Added tests for the workspace sidecar functionality, including validation of the JSON schema and ensuring proper error handling for workspace mismatches.
- Updated existing tests to reflect changes in deployment mode handling and added new tests for signal handling during shutdown.
- Ensured that cleanup routines remove the workspace sidecar alongside the PID file during shutdown.
* fix(langgraph): improve workspace sidecar checks for process ownership and stale handles