EvoScientist/pyproject.toml

[project]
name = "EvoScientist"
version = "0.2.3"
description = "EvoScientist: Towards Self-Evolving AI Scientists for End-to-End Scientific Discovery"
readme = "README.md"
requires-python = ">=3.11"
license = "Apache-2.0"
authors = [
    { name = "Xi Zhang" },
]
maintainers = [
    { name = "Xi Zhang" },
]
keywords = ["ai-scientific", "scientific-discovery", "self-evolving", "ai-scientists", "end-to-end"]
classifiers = [
    "Programming Language :: Python :: 3",
]
dependencies = [
    "deepagents[quickjs]~=0.6.12",
    "langchain>=1.3",
    "langchain-anthropic>=1.4",
    "langchain-openai>=1.2",
    "langchain-nvidia-ai-endpoints>=1.2",
    "langchain-google-genai>=4.2",
    "langchain-ollama>=1.1",
    "langchain-openrouter>=0.2.5",
    "tavily-python>=0.7",
    "pyyaml>=6.0",
    "rich>=15.0",
    "prompt-toolkit>=3.0",
    "questionary>=2.1",
    "typer>=0.24",
    "python-dotenv>=1.0",
    "langgraph-cli[inmem]>=0.4",
    "langgraph-checkpoint-sqlite>=3.0",
    "httpx>=0.28",
    "pydantic>=2.10",
    # Delegation JWT verification for the model registry HTTP API (7.3);
    # previously only a transitive dependency, now used directly.
    "PyJWT>=2.8",
    # read_file image pipeline (sniff/downsample) in middleware/read_file_images.
    "Pillow>=10",
    "psutil>=6.0",
    "filelock>=3.16",
    "lazy-loader>=0.5",
    "markdownify>=1.2",
    "nest-asyncio>=1.6",
    "tzlocal>=5.0",
    "langchain-mcp-adapters>=0.2",
    # <8.2.7: 8.2.7 Kitty "report-all-keys" breaks CJK input on iTerm2
    "textual>=8.0,<8.2.7",
]

[dependency-groups]
dev = [
    "pytest>=8.0",
    "pytest-asyncio>=1.0",
    "pytest-cov>=5.0",
    "pytest-timeout>=2.4",
    "ruff>=0.5",
    "build>=1.0",
    "pre-commit>=3.5.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=8.0",
    "pytest-asyncio>=1.0",
    "pytest-cov>=5.0",
    "pytest-timeout>=2.4",
    "ruff>=0.5",
    "build>=1.0",
    "pre-commit>=3.5.0",
]
telegram = ["python-telegram-bot>=21.0"]
discord = ["discord.py>=2.3"]
slack = ["slack-sdk>=3.27", "aiohttp>=3.9"]
wechat = ["pycryptodome>=3.20", "aiohttp>=3.9", "qrcode>=7.4", "certifi>=2024.0"]
feishu = ["lark-oapi>=1.4.0"]
qq = [
    "qq-botpy>=1.0",
    "cryptography>=41.0",
    "qrcode>=7.4",
]
stt = ["faster-whisper>=1.0"]
oauth = ["ccproxy-api>=0.2.7"]
all-channels = [
    "python-telegram-bot>=21.0",
    "discord.py>=2.3",
    "aiohttp>=3.9",
    "slack-sdk>=3.27",
    "pycryptodome>=3.20",
    "qrcode>=7.4",
    "certifi>=2024.0",
    "lark-oapi>=1.4.0",
    "qq-botpy>=1.0",
    "cryptography>=41.0",
    "qrcode>=7.4",
]

[project.urls]
"Homepage" = "https://github.com/EvoScientist/EvoScientist"
"Bug Tracker" = "https://github.com/EvoScientist/EvoScientist/issues"
"Documentation" = "https://github.com/EvoScientist/EvoScientist#readme"

[project.scripts]
evoscientist = "EvoScientist.cli:main"
EvoScientist = "EvoScientist.cli:main"
evosci = "EvoScientist.cli:main"
EvoSci = "EvoScientist.cli:main"

[build-system]
requires = ["setuptools>=68.0"]
build-backend = "setuptools.build_meta"

[tool.setuptools.packages.find]
include = ["EvoScientist*"]

[tool.setuptools.package-data]
EvoScientist = [
    "subagents/*.yaml",
    "langgraph_dev/*.json",
    "skills/**/*",
]

[tool.pytest.ini_options]
testpaths = ["tests"]
asyncio_mode = "auto"
asyncio_default_fixture_loop_scope = "function"
filterwarnings = [
    "ignore::UserWarning:langchain_nvidia_ai_endpoints",
]

[tool.ruff]
# Exclude a variety of commonly ignored directories.
exclude = [
    ".bzr",
    ".direnv",
    ".eggs",
    ".git",
    ".git-rewrite",
    ".hg",
    ".ipynb_checkpoints",
    ".mypy_cache",
    ".nox",
    ".pants.d",
    ".pyenv",
    ".pytest_cache",
    ".pytype",
    ".ruff_cache",
    ".svn",
    ".tox",
    ".venv",
    ".vscode",
    "__pypackages__",
    "_build",
    "buck-out",
    "build",
    "dist",
    "node_modules",
    "site-packages",
    "venv",
]

line-length = 88
indent-width = 4
target-version = "py311"

[tool.ruff.lint]
select = [
    "E", "W",  # pycodestyle (Error & Warning)
    "F",       # Pyflakes (Logical errors)
    "I",       # isort (Import sorting)
    "B",       # flake8-bugbear (Common bugs)
    "C4",      # flake8-comprehensions (List/Dict perf)
    "UP",      # pyupgrade (Modern Python syntax)
    "PT",      # flake8-pytest-style (If using Pytest)
    "PLE",     # Pylint Error
    "RUF",     # Ruff specific rules
    "FURB",    # Refurb rules
]
ignore = [
    "E501", # Formatter takes care of that
]
fixable = ["ALL"]
unfixable = []
allowed-confusables = ["–", "❯", "：", "（", "）", "，"]

[tool.ruff.format]
quote-style = "double"
indent-style = "space"
skip-magic-trailing-comma = false
line-ending = "auto"
docstring-code-format = false