Two corrections on top of the #71077 base (the whole bug class):
1. Turn boundary = last USER message, not last assistant message. A Codex
turn spans several assistant messages (assistant+tool_calls -> tool ->
... -> final assistant) whose reasoning items must replay together; the
last-assistant boundary would strip reasoning mid-chain from the active
turn (the gap flagged in PR #71077 review).
2. type="compaction" checkpoints (native server-side compaction, PR #81747)
are exempt: they carry already-pruned history, not per-turn reasoning.
Pruning filters items instead of popping the sidecar key.
Sibling site fixed in the same class: the Codex incomplete-continuation
dedup path blind-overwrote codex_reasoning_items on visually-duplicate
interim messages, which would drop the only copy of a checkpoint captured
on the earlier response. Extracted merge_interim_reasoning_items() into
agent/native_compaction.py; newer reasoning wins, prior checkpoints are
preserved unless the newer payload carries its own.
Teknium