"""state.db file-level health helpers, split out of ``hermes_state.py``. Header probes (application_id / zeroed-file detection), deleted-WAL-sidecar holder scans, quarantine of zeroed databases, ``collect_state_db_stats`` and holder-process classification. Helpers that hermes_state itself imports and calls (``_connect_tracked_db`` & co) are looked up lazily from ``hermes_state`` at call time, so tests that monkeypatch ``hermes_state.`` keep intercepting. """ from __future__ import annotations import contextlib import json import logging import os import sqlite3 import struct import sys import threading import time from pathlib import Path from typing import Any, Dict, List, Optional, Set, Tuple from hermes_state_common import ( FTS_REBUILD_DEFERRAL_KEY, stat_db_file_identity as _stat_db_file_identity ) # Log-record parity with the origin module (caplog tests pin "hermes_state"). logger = logging.getLogger("hermes_state") # _read_sqlite_application_id runs on EVERY write (_raise_if_db_replaced) against the LIVE # state.db. A bare open()/read()/close() there is the howtocorrupt §2.2 bug: close() cancels # every POSIX advisory lock this process holds on the file, dropping the writer's WAL-mode DMS # shared lock (see hermes_cli/sqlite_safe_read.py) so another process can treat this writer as # dead and rerun WAL-index recovery underneath it. So the probe preads through a per-path fd # cached for the life of the process (opening never cancels locks). When the path is re-pointed # at a new inode (the very replacement this probe detects) the stale fd is RETIRED, never closed # — closing it would cancel the live connection's locks. Replacements are rare and halt writes. _HEADER_PROBE_LOCK = threading.Lock() _HEADER_PROBE_FDS: "dict[str, tuple[int, int, int]]" = {} # key -> (fd, dev, ino) _RETIRED_HEADER_PROBE_FDS: "list[int]" = [] # intentionally never closed _FTS_TABLE_NAMES = ("messages_fts", "messages_fts_trigram", "messages_fts_cjk") def _pread_db_header(db_path: Path, length: int) -> "Optional[bytes]": """Lock-safe raw header read of a possibly-live SQLite database: POSIX preads from a cached, never-closed fd (rebound when the path names a new inode); Windows reads plainly, since advisory-lock cancellation is a POSIX-only hazard.""" from hermes_state import _IS_WINDOWS if _IS_WINDOWS: with contextlib.suppress(OSError), db_path.open("rb") as handle: return handle.read(length) return None key = str(db_path) try: st = os.stat(db_path) except OSError: return None with _HEADER_PROBE_LOCK: cached = _HEADER_PROBE_FDS.get(key) if cached is not None and (cached[1], cached[2]) != (st.st_dev, st.st_ino): # Path re-pointed at a new file. Retire (never close) the old fd. _RETIRED_HEADER_PROBE_FDS.append(_HEADER_PROBE_FDS.pop(key)[0]) cached = None if cached is None: try: fd = os.open(db_path, os.O_RDONLY) except OSError: return None try: fst = os.fstat(fd) except OSError: _RETIRED_HEADER_PROBE_FDS.append(fd) return None cached = _HEADER_PROBE_FDS[key] = (fd, fst.st_dev, fst.st_ino) with contextlib.suppress(OSError): return os.pread(cached[0], length, 0) return None def _read_sqlite_application_id(db_path: Path) -> "Optional[int]": """application_id from the SQLite header, via the lock-safe :func:`_pread_db_header`.""" from hermes_state_errors import _STATE_DB_APPLICATION_ID_OFFSET end = _STATE_DB_APPLICATION_ID_OFFSET + 4 header = _pread_db_header(db_path, end) if header is None or len(header) < end or header[:16] != b"SQLite format 3\x00": return None return int(struct.unpack(">I", header[_STATE_DB_APPLICATION_ID_OFFSET:end])[0]) def _stat_sqlite_sidecar_identity(db_path: Path) -> Dict[str, tuple]: """Snapshot ``(st_dev, st_ino)`` for existing WAL/SHM sidecars.""" base = os.fspath(db_path) idents = {suffix: _stat_db_file_identity(Path(base + suffix)) for suffix in ("-wal", "-shm")} return {suffix: ident for suffix, ident in idents.items() if ident is not None} def _canonical_sqlite_path(path: str) -> str: """Normalize a /proc fd target, stripping the Linux `` (deleted)`` suffix.""" return os.path.normcase(os.path.abspath(path.removesuffix(" (deleted)"))) def _watched_sqlite_sidecar_paths(db_path) -> Set[str]: base = os.path.abspath(os.fspath(db_path)) return {_canonical_sqlite_path(base + "-wal"), _canonical_sqlite_path(base + "-shm")} def _iter_proc_fd_targets(): """Yield ``(pid, readlink target)`` for every readable ``/proc//fd`` entry.""" for pid_str in os.listdir("/proc"): if not pid_str.isdigit(): continue fd_dir = f"/proc/{pid_str}/fd" try: fds = os.listdir(fd_dir) except OSError: continue # process gone or not ours for fd in fds: with contextlib.suppress(OSError): yield int(pid_str), os.readlink(f"{fd_dir}/{fd}") def iter_deleted_sqlite_sidecar_holders(db_path) -> List[Tuple[int, str]]: """Return processes holding an unlinked ``state.db-wal`` / ``-shm``. Linux-only; ``[]`` elsewhere (Windows cannot unlink a held sidecar, macOS has no `` (deleted)`` suffix). Includes this process: on the open/write refuse path the in-process writer holding the orphan inode must not mint a replacement WAL (``_foreign_state_db_holders`` skips this PID).""" if not sys.platform.startswith("linux"): return [] holders: List[Tuple[int, str]] = [] watched = _watched_sqlite_sidecar_paths(db_path) try: for pid, target in _iter_proc_fd_targets(): if " (deleted)" in target and _canonical_sqlite_path(target) in watched: holders.append((pid, target)) except Exception as exc: logger.debug("deleted-WAL holder scan failed for %s: %s", db_path, exc) return holders def refuse_deleted_wal_generation(db_path) -> None: """Raise if any process holds a deleted WAL/SHM generation for *db_path*; called *before* ``sqlite3.connect`` so a second opener cannot mint a replacement WAL inode.""" from hermes_state import DeletedWalGenerationError from hermes_state_errors import _DELETED_WAL_GENERATION_MSG if not iter_deleted_sqlite_sidecar_holders(db_path): return logger.error(_DELETED_WAL_GENERATION_MSG) raise DeletedWalGenerationError(_DELETED_WAL_GENERATION_MSG) def _connect_tracked_db(path, tracking_path=None, **kwargs): """``sqlite3.connect`` that registers the open fd so byte-level probes of a live file are refused (an ``open()``/``close()`` would cancel every POSIX lock, even a running VACUUM's EXCLUSIVE). The ONLY tolerated fallback is the helper being absent (scaffold/embed installs without hermes_cli); a real connection failure must propagate — a silent untracked retry would disable the guard for that connection.""" try: from hermes_cli.sqlite_safe_read import connect_tracked except ImportError: logger.debug("hermes_cli.sqlite_safe_read unavailable; opening %s untracked " "(byte-probe guard inactive in this install)", path) return sqlite3.connect(str(path), **kwargs) # Open through THIS module's sqlite3.connect so tests patching hermes_state.sqlite3.connect keep control. return connect_tracked(path, tracking_path=tracking_path, connect_fn=sqlite3.connect, **kwargs) def is_zeroed_state_db(path: Path, *, probe_bytes: int = 100, force: bool = False) -> bool: """Detect the zeroed state.db signature (0-byte or NUL header). Byte-level probe, so only safe BEFORE any connection to *path* exists in this process (``close()`` cancels every POSIX lock, even a running VACUUM's EXCLUSIVE); ``read_header_bytes_preopen`` refuses (-> False) once a connection is live. Pass ``force=True`` only for offline files (quarantined copies, snapshots). Prefers ``hermes_cli.backup.is_zeroed_sqlite_file``; this copy keeps SessionDB openable without the CLI package in constrained embed paths. See #97568. """ with contextlib.suppress(Exception): from hermes_cli.backup import is_zeroed_sqlite_file return is_zeroed_sqlite_file(path, probe_bytes=probe_bytes, force=force) try: # Special files (FIFO, device, socket) are never "zeroed", and probing # a FIFO would block until a writer appears. if not path.is_file(): return False path.stat() except OSError: return False from hermes_cli.sqlite_safe_read import has_live_connection, read_header_bytes_preopen if not force and has_live_connection(path): return False head = read_header_bytes_preopen(path, length=max(16, probe_bytes), force=force) # b"" (0-byte file) is zeroed; all() over an empty header is True. return head is not None and not head.startswith(b"SQLite format 3") and all(b == 0 for b in head) @contextlib.contextmanager def quarantine_cross_process_lock(path: Path, timeout: float = 5.0): """Acquire the cross-process lock for path.quarantine.lock.""" import platform lock_path = path.with_name(path.name + ".quarantine.lock") lock_path.parent.mkdir(parents=True, exist_ok=True) handle = lock_path.open("a+b") acquired = False try: if platform.system() == "Windows": import msvcrt def _lock(mode): # msvcrt locks a byte range from the current position handle.seek(0) msvcrt.locking(handle.fileno(), mode, 1) _try_lock = lambda: _lock(msvcrt.LK_NBLCK) # noqa: E731 _unlock = lambda: _lock(msvcrt.LK_UNLCK) # noqa: E731 else: import fcntl _try_lock = lambda: fcntl.flock(handle.fileno(), fcntl.LOCK_EX | fcntl.LOCK_NB) # noqa: E731 _unlock = lambda: fcntl.flock(handle.fileno(), fcntl.LOCK_UN) # noqa: E731 deadline = time.monotonic() + timeout while not acquired: try: _try_lock() acquired = True except OSError: if time.monotonic() >= deadline: break time.sleep(0.020) yield acquired finally: try: if acquired: _unlock() except (OSError, AttributeError): pass finally: handle.close() def quarantine_zeroed_state_db(path: Path, *, already_locked: bool = False) -> Optional[Path]: """Move a zeroed state.db aside (preserve bytes) and return quarantine path. A cross-process lock stops two concurrent startups racing: the second re-checks under the lock and finds the file gone (or fresh) instead of clobbering the quarantine.""" def _do_quarantine(): if not path.exists(): logger.info("quarantine_zeroed_state_db: %s already moved by another process", path) return None if not is_zeroed_state_db(path): logger.info("quarantine_zeroed_state_db: %s is no longer zeroed (another " "process quarantined it and a fresh DB was created)", path) return None try: ts = time.strftime("%Y%m%d-%H%M%S") except Exception: ts = "unknown" stem = f"{path.name}.zeroed-{ts}-{os.getpid()}" dest = path.with_name(f"{stem}.bak") n = 0 while dest.exists(): n += 1 dest = path.with_name(f"{stem}-{n}.bak") try: path.rename(dest) except OSError as exc: logger.error("Failed to quarantine zeroed %s: %s", path, exc) return None for suffix in ("-wal", "-shm"): side = Path(str(path) + suffix) if side.exists(): with contextlib.suppress(OSError): side.rename(Path(str(dest) + suffix)) return dest if already_locked: return _do_quarantine() with quarantine_cross_process_lock(path) as acquired: if not acquired: logger.error("quarantine lock for %s not acquired within 5s — refusing to " "quarantine without the cross-process lock. The zeroed file " "is left in place. If sessions fail to load, restore from " "state-snapshots via `hermes snapshot list` / `hermes snapshot restore `.", path) return None return _do_quarantine() def collect_state_db_stats(db_path: Path) -> Dict[str, Any]: """Best-effort, strictly read-only stats snapshot of a state.db file: ``mode=ro`` with a short timeout so it can run against a *live* database without taking a write lock. Every field is collected independently (a failed pragma/SELECT yields ``None`` for it); never raises. Deliberately does NOT instantiate :class:`SessionDB` — its constructor runs DDL. ``wal_size_bytes`` is 0 when the sidecar is absent; ``fts_storage_version`` None means the legacy inline layout; ``fts_rebuild_deferral`` is the durable blocked-repair diagnostic.""" from hermes_state import _connect_tracked_db stats: Dict[str, Any] = dict.fromkeys(( "page_count", "page_size", "freelist_count", "logical_size_bytes", "wal_size_bytes", "journal_mode", "messages", "sessions", "fts_tables", "fts_storage_version", "fts_rebuild_pending", "fts_rebuild_high_water", "fts_rebuild_progress", "fts_rebuild_deferral")) # WAL sidecar size needs no connection at all. with contextlib.suppress(OSError): wal_path = Path(str(db_path) + "-wal") stats["wal_size_bytes"] = wal_path.stat().st_size if wal_path.exists() else 0 try: # A short timeout keeps doctor snappy when a writer holds the lock. The tracked connect # lets byte-probe helpers see this connection and refuse raw opens that would cancel locks. conn = _connect_tracked_db(f"file:{Path(db_path)}?mode=ro", tracking_path=Path(db_path), uri=True, timeout=2.0) except Exception as exc: logger.debug("collect_state_db_stats: cannot open %s read-only: %s", db_path, exc) return stats def _scalar(sql: str, params=()) -> Any: try: row = conn.execute(sql, params).fetchone() return row[0] if row else None except Exception: return None def _int(sql: str, params=()) -> Optional[int]: value = _scalar(sql, params) return int(value) if value is not None else None def _meta_int(key: str) -> Optional[int]: try: # a non-numeric meta value must yield None, not fail the snapshot return _int("SELECT value FROM state_meta WHERE key = ?", (key,)) except Exception: return None try: stats["page_count"] = _int("PRAGMA page_count") stats["page_size"] = _int("PRAGMA page_size") if stats["page_count"] is not None and stats["page_size"] is not None: stats["logical_size_bytes"] = stats["page_count"] * stats["page_size"] stats["freelist_count"] = _int("PRAGMA freelist_count") jm = _scalar("PRAGMA journal_mode") stats["journal_mode"] = str(jm) if jm is not None else None stats["messages"] = _int("SELECT COUNT(*) FROM messages") stats["sessions"] = _int("SELECT COUNT(*) FROM sessions") # FTS table presence via sqlite_master (never SELECTs from the # virtual tables themselves — a corrupt index must not fail stats). with contextlib.suppress(Exception): names = {row[0] for row in conn.execute( "SELECT name FROM sqlite_master WHERE type = 'table' AND name IN (?, ?, ?)", _FTS_TABLE_NAMES).fetchall()} stats["fts_tables"] = {t: (t in names) for t in _FTS_TABLE_NAMES} # Raw state_meta reads — cheap, and independent of SessionDB. stats["fts_storage_version"] = _meta_int("fts_storage_version") stats["fts_rebuild_high_water"] = high_water = _meta_int("fts_rebuild_high_water") stats["fts_rebuild_progress"] = progress = _meta_int("fts_rebuild_progress") stats["fts_rebuild_pending"] = False if high_water is None else (progress or 0) < high_water with contextlib.suppress(Exception): row = conn.execute("SELECT value FROM state_meta WHERE key = ? LIMIT 1", (FTS_REBUILD_DEFERRAL_KEY,)).fetchone() parsed = json.loads(row[0]) if row else None if isinstance(parsed, dict): stats["fts_rebuild_deferral"] = parsed finally: with contextlib.suppress(Exception): conn.close() return stats def count_db_holders(db_path: Path) -> Optional[int]: """Best-effort count of distinct PIDs holding ``db_path`` open (``/proc/*/fd`` scan); ``None`` on any error or non-Linux host, never raises. Unreadable fd dirs (other users' processes without root) are skipped, so this is a lower bound.""" try: if not sys.platform.startswith("linux"): return None target = os.path.realpath(str(db_path)) return len({pid for pid, link in _iter_proc_fd_targets() if link == target}) except Exception: return None def _is_inactive_orphan_desktop_holder(*, ppid: int, age_seconds: float, min_age_seconds: float, ephemeral_backend: bool, connection_statuses: List[str]) -> bool: """Pure safety predicate for the narrow Desktop holder reap.""" return (ppid in (0, 1) and age_seconds >= min_age_seconds and ephemeral_backend and "ESTABLISHED" not in connection_statuses) def _concrete_state_db_holder_pids(db_path: Path, holders: List[Tuple[int, str]]) -> List[int]: """Return unique PIDs proven to hold this DB or one of its sidecars.""" canonical_db = os.path.normcase(os.path.abspath(os.fspath(db_path))) watched = {canonical_db, canonical_db + "-wal", canonical_db + "-shm"} return list(dict.fromkeys( pid for pid, path in holders if pid > 0 and _canonical_sqlite_path(path) in watched))