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hermes-agent/skills/productivity/ocr-and-documents/SKILL.md
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Teknium 4a2198bf51 fix: Windows MCP PATHEXT resolution + python3 -> python in cross-platform skills (#84429)
Two Windows agent-loop friction fixes:

1. tools/mcp_tool.py (#56536): shutil.which(cmd, path=env_path) reads
   executable extensions from the PARENT process PATHEXT, not the MCP
   subprocess env — a stdio MCP config supplying both PATH and PATHEXT
   could fail to resolve a command its own env can locate, and startup
   then got a bare command name. On Windows, when the first which() call
   misses and the config env carries PATHEXT (any key casing), retry the
   resolution with the config's PATHEXT temporarily applied.

2. skills/ + optional-skills/ (#50606): 42 SKILL.md files that declare
   platforms: [.., windows] used python3 in their command examples.
   python3 does not exist on native Windows (the toolchain probe in the
   system prompt reports python3=missing), so every copy-pasted example
   burned a failed agent turn before self-correction. Replaced the
   command word python3 -> python (python3-config / python3.x version
   strings untouched). python is the spelling that exists in every
   Hermes-managed environment (Windows native, uv-managed venvs on all
   three OSes); agents on POSIX hosts additionally see the probed
   toolchain line and adapt either way.
2026-08-12 02:43:28 -07:00

5.6 KiB

name, description, version, author, license, platforms, metadata
name description version author license platforms metadata
ocr-and-documents Extract text from PDFs/scans (pymupdf, marker-pdf). 2.3.0 Hermes Agent MIT
linux
macos
windows
hermes
tags related_skills
PDF
Documents
Research
Arxiv
Text-Extraction
OCR
pdf
docx
powerpoint

PDF & Document Extraction

For DOCX: see the docx skill (create/edit) or use python-docx for structured reads. For PPTX: see the powerpoint skill (full create/read/edit support). For PDF manipulation (merge, split, forms, watermarks, creation): see the pdf skill. This skill covers text extraction from PDFs and scanned documents.

Coming from a read_file EXTRACTION COVERAGE WARNING? read_file auto-converts local PDFs but reads the text layer only; the warning footer lists the pages that yielded no text (scanned images). For a handful of pages, render + vision is fastest: pdftoppm -jpeg -r 150 -f N -l N file.pdf /tmp/page then vision_analyze each image. For bulk OCR of many pages, use marker-pdf below (Step 2).

Step 1: Remote URL Available?

If the document has a URL, always try web_extract first:

web_extract(urls=["https://arxiv.org/pdf/2402.03300"])
web_extract(urls=["https://example.com/report.pdf"])

This handles PDF-to-markdown conversion via Firecrawl with no local dependencies.

Only use local extraction when: the file is local, web_extract fails, or you need batch processing.

Step 2: Choose Local Extractor

Feature pymupdf (~25MB) marker-pdf (~3-5GB)
Text-based PDF ✅ ✅
Scanned PDF (OCR) ❌ ✅ (90+ languages)
Tables ✅ (basic) ✅ (high accuracy)
Equations / LaTeX ❌ ✅
Code blocks ❌ ✅
Forms ❌ ✅
Headers/footers removal ❌ ✅
Reading order detection ❌ ✅
Images extraction ✅ (embedded) ✅ (with context)
Images → text (OCR) ❌ ✅
EPUB ✅ ✅
Markdown output ✅ (via pymupdf4llm) ✅ (native, higher quality)
Install size ~25MB ~3-5GB (PyTorch + models)
Speed Instant ~1-14s/page (CPU), ~0.2s/page (GPU)

Decision: Use pymupdf unless you need OCR, equations, forms, or complex layout analysis.

If the user needs marker capabilities but the system lacks ~5GB free disk:

"This document needs OCR/advanced extraction (marker-pdf), which requires ~5GB for PyTorch and models. Your system has [X]GB free. Options: free up space, provide a URL so I can use web_extract, or I can try pymupdf which works for text-based PDFs but not scanned documents or equations."


pymupdf (lightweight)

pip install pymupdf pymupdf4llm

Via helper script:

python scripts/extract_pymupdf.py document.pdf              # Plain text
python scripts/extract_pymupdf.py document.pdf --markdown    # Markdown
python scripts/extract_pymupdf.py document.pdf --tables      # Tables
python scripts/extract_pymupdf.py document.pdf --images out/ # Extract images
python scripts/extract_pymupdf.py document.pdf --metadata    # Title, author, pages
python scripts/extract_pymupdf.py document.pdf --pages 0-4   # Specific pages

Inline:

python -c "
import pymupdf
doc = pymupdf.open('document.pdf')
for page in doc:
    print(page.get_text())
"

marker-pdf (high-quality OCR)

# Check disk space first
python scripts/extract_marker.py --check

pip install marker-pdf

Via helper script:

python scripts/extract_marker.py document.pdf                # Markdown
python scripts/extract_marker.py document.pdf --json         # JSON with metadata
python scripts/extract_marker.py document.pdf --output_dir out/  # Save images
python scripts/extract_marker.py scanned.pdf                 # Scanned PDF (OCR)
python scripts/extract_marker.py document.pdf --use_llm      # LLM-boosted accuracy

CLI (installed with marker-pdf):

marker_single document.pdf --output_dir ./output
marker /path/to/folder --workers 4    # Batch

Arxiv Papers

# Abstract only (fast)
web_extract(urls=["https://arxiv.org/abs/2402.03300"])

# Full paper
web_extract(urls=["https://arxiv.org/pdf/2402.03300"])

# Search
web_search(query="arxiv GRPO reinforcement learning 2026")

pymupdf handles these natively — use execute_code or inline Python:

# Split: extract pages 1-5 to a new PDF
import pymupdf
doc = pymupdf.open("report.pdf")
new = pymupdf.open()
for i in range(5):
    new.insert_pdf(doc, from_page=i, to_page=i)
new.save("pages_1-5.pdf")
# Merge multiple PDFs
import pymupdf
result = pymupdf.open()
for path in ["a.pdf", "b.pdf", "c.pdf"]:
    result.insert_pdf(pymupdf.open(path))
result.save("merged.pdf")
# Search for text across all pages
import pymupdf
doc = pymupdf.open("report.pdf")
for i, page in enumerate(doc):
    results = page.search_for("revenue")
    if results:
        print(f"Page {i+1}: {len(results)} match(es)")
        print(page.get_text("text"))

No extra dependencies needed — pymupdf covers split, merge, search, and text extraction in one package.


Notes

  • web_extract is always first choice for URLs
  • pymupdf is the safe default — instant, no models, works everywhere
  • marker-pdf is for OCR, scanned docs, equations, complex layouts — install only when needed
  • Both helper scripts accept --help for full usage
  • marker-pdf downloads ~2.5GB of models to ~/.cache/huggingface/ on first use
  • For Word docs: pip install python-docx (better than OCR — parses actual structure)
  • For PowerPoint: see the powerpoint skill (uses python-pptx)