leomcamilo bcc2e65818 fix(state): quarantine SessionDB handle after structural corruption ...

A bare SQLITE_CORRUPT/NOTADB on a live write (not FTS-scoped, not a
replaced file) now sets a sticky per-instance flag: later writes fail
fast with StateDbCorruptError, the handle never reopens after close(),
and close() skips its explicit PASSIVE WAL checkpoint. Gateway and agent
flush paths divert pending transcripts to JSONL/spool like the replaced
case instead of retrying forever.

Field evidence: a handle that kept writing for ~50 minutes after the
first structural error checkpointed 15 pages under the wrong page
numbers on shutdown (page 1 <- messages_fts_trigram_data leaf), turning
"malformed" into "file is not a database".

Refs #90837, #90950, #97940, #89332, #45383

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01CNX8rNYHqA5pT4tAGSzXtb

2026-09-02 16:57:21 +05:30

..

acp

fix(approval): stop the CLI and ACP offering a scope the protected gate discards

2026-08-23 17:45:47 -05:00

acp_adapter

…

agent

fix(compression): persist the anti-thrash recovery deadline so gateway agent rebuilds cannot block a session forever

2026-09-02 04:14:10 -07:00

ci

fix(update): Windows progress server hands out its URL only once it is serving

2026-09-02 00:44:19 -07:00

cli

fix(sessions): Desktop resume of a heavily-compacted chat no longer fails with 4130

2026-09-01 22:14:33 -07:00

computer_use

fix(computer_use): disable embedded daemon overlay

2026-08-26 00:54:36 -07:00

conformance

fix(conformance): make the journal-mode matrix honest — steer the child resolver, audit the effective mode

2026-08-24 15:54:23 +05:30

cron

fix(cron): don't silently skip a due run after a timezone-offset migration

2026-09-02 15:13:46 +05:30

dashboard

…

desktop

test(desktop): harden rebind assertions per #94417 review

2026-08-26 07:28:10 -07:00

docker

…

e2e

fix(tests): e2e group-restart test no longer flakes on cold SessionDB init

2026-08-24 21:21:34 -07:00

fakes

…

fixtures

feat(bot-mode): add scoped cross-gateway Group Chat transport

2026-08-31 01:04:11 -07:00

gateway

fix(state): quarantine SessionDB handle after structural corruption

2026-09-02 16:57:21 +05:30

hermes_cli

fix(cron): make cron push-notify configurable (cron.delivery.notify) and surface UNVERIFIED live deliveries in cron list/doctor

2026-09-02 00:56:52 -07:00

hermes_state

fix(state): quarantine SessionDB handle after structural corruption

2026-09-02 16:57:21 +05:30

honcho_plugin

fix(honcho): gate memory-file migration on the declared owner

2026-08-13 23:43:15 +05:30

install

…

integration

…

manual

…

monitoring

…

openviking_plugin

fix(openviking): clarify remember submission status

2026-09-01 14:11:55 +05:30

perf_guards

refactor(test): fold simplify-code review findings into perf guards

2026-08-28 11:54:33 +05:30

plugins

fix(dashboard-auth): a non-JWT bearer is "not my token", not "provider unreachable" (#94558)

2026-09-02 01:15:58 -07:00

providers

fix(providers): surface Alibaba China in desktop parity

2026-08-29 18:01:25 -07:00

relay

fix(relay): prompt-lifecycle acks are fire-and-forget — awaiting them ON the read loop self-deadlocked the transport

2026-08-20 19:56:01 -07:00

run_agent

fix(state): quarantine SessionDB handle after structural corruption

2026-09-02 16:57:21 +05:30

scripts

test(contributors): casefold collision key, drop stale allowlist, cover same-login case

2026-09-02 00:06:01 -07:00

secret_sources

…

skills

refactor(skills): shipped-set slim — 15 to optional, github 6-way merge, pdf absorbs OCR, channel-gated teams pipeline (index −26%) (#98539)

2026-08-30 04:53:39 -07:00

state

fix(state): quarantine SessionDB handle after structural corruption

2026-09-02 16:57:21 +05:30

tools

perf(bot-mode): cold DM hops skip the live /models probe; relay replies land within 250ms

2026-09-02 03:42:01 -07:00

tui_gateway

fix(tui-gateway): adopt late compute-host compress acks instead of a false 120s timeout (#97948)

2026-09-02 01:35:59 -07:00

verify

…

website

fix(docs): index every docs page in llms.txt, not a hand-picked 98

2026-08-19 12:41:45 -05:00

__init__.py

…

conftest.py

feat(web): add Tavily web search and extract provider

2026-09-01 10:56:49 -07:00

install_ps1_fake_uv.py

test(installer): cover managed Python timeout

2026-09-01 09:28:01 -07:00

run_interrupt_test.py

…

test_89315_replace_ownership_guard.py

fix(gateway): prove --replace ownership from the bound pid record

2026-08-24 15:37:22 +05:30

test_98924_readonly_fts_decode_error.py

fix(state): reject special files in zeroed probe; real schema-bytes decode fixture

2026-08-31 09:56:43 -07:00

test_account_usage.py

…

test_active_session_exclusivity.py

fix(sessions): per-session exclusivity is correctness, not a capacity policy

2026-08-31 12:36:33 -07:00

test_atomic_replace_symlinks.py

…

test_atomic_write_text_metadata.py

…

test_audio_playback_guard.py

fix: use handle_request for voice.toggle in audio guard test

2026-08-13 22:44:23 +05:30

test_background_review_list_shapes.py

…

test_background_review_session_isolation.py

…

test_base_url_hostname.py

…

test_batch_runner_checkpoint.py

fix(batch_runner): teach the resume content scan to honor discard tombstones

2026-08-24 03:21:07 -07:00

test_batch_runner_discard_resume.py

fix(batch_runner): teach the resume content scan to honor discard tombstones

2026-08-24 03:21:07 -07:00

test_batch_runner_durability.py

…

test_batch_runner_exit_code.py

fix(batch_runner): propagate fatal and validation errors as non-zero exit codes

2026-08-16 01:50:20 -07:00

test_bitwarden_secrets.py

…

test_cli_manual_compress.py

…

test_cli_quiet_stdout_leak.py

fix(cli): -Q stdout carries only the final response — no tool diffs, spinner lines, or reasoning

2026-08-23 17:01:31 -07:00

test_cli_skin_integration.py

…

test_code_skew.py

fix(dashboard): drop systemd-only advice from the model-picker code-skew 503 (#97046)

2026-08-31 20:43:36 -05:00

test_command_secret_source.py

…

test_compaction_prompt_rebuild.py

feat(compaction): system prompt always rebuilds at the commit boundary — updates finally reach long-lived sessions (#98426)

2026-08-30 01:20:27 -07:00

test_compaction_tool_refresh.py

feat(compaction): system prompt always rebuilds at the commit boundary — updates finally reach long-lived sessions (#98426)

2026-08-30 01:20:27 -07:00

test_compression_watermark_commit.py

Merge upstream main into PR 81234

2026-08-16 12:20:50 +02:00

test_conftest_wal_gate.py

…

test_copilot_initiator.py

…

test_credential_file_permissions.py

…

test_cron_manage_profile_scope.py

fix(bot-mode): show profile-owned cronjobs

2026-08-17 16:34:02 -07:00

test_ctx_halving_fix.py

…

test_delegate_cascade_49148.py

…

test_desktop_update_shim_progress.py

test: shim-progress fake hermes answers the --keep-stash --help probe

2026-08-20 04:54:14 -07:00

test_desktop_update_tcc_heal.py

fix(desktop-update): self-heal a TCC-anchor-bricked venv in the posix hand-off (#95759)

2026-09-01 08:36:03 -07:00

test_desktop_update_windows_pipe_drain.py

fix(update): count logs/update.log growth as watchdog progress

2026-08-26 18:23:33 -07:00

test_desktop_update_windows_progress.py

fix(update): Windows progress server hands out its URL only once it is serving

2026-09-02 00:44:19 -07:00

test_desktop_update_windows_python_handoff.py

test: normalize CRLF in the windows.ps1 handoff guard reader

2026-08-26 18:23:33 -07:00

test_desktop_update_windows_retry_policy.py

fix(scripts): clarify Windows update retry marker semantics

2026-08-31 10:05:13 -07:00

test_desktop_update_windows_timestamp.py

fix(windows): avoid locale-sensitive update timestamps

2026-08-14 15:41:38 -05:00

test_dispatch_session_id.py

…

test_display_hermes_home.py

fix(paths): display_hermes_home renders POSIX separators on Windows — kills ~/AppData\Local\hermes chimeras in tool schemas and user-facing messages (#97137)

2026-08-28 05:45:00 -07:00

test_empty_model_fallback.py

…

test_empty_session_hygiene.py

…

test_engines_satisfiable.py

fix(install): Node 24.0–24.10 no longer passes the gates only to die at npm EBADENGINE

2026-08-28 12:20:40 -07:00

test_env_loader_applied_homes.py

…

test_env_loader_op_bootstrap.py

…

test_env_loader_secret_sources.py

…

test_estop.py

fix(estop): honor canonical ~/.hermes/ESTOP from profile gateways

2026-09-01 00:35:29 +05:30

test_evidence_store.py

…

test_fast_safe_load.py

…

test_fts_cjk_bigram.py

…

test_fts_update_of_narrowing.py

fix(state): honor _ensure_fts_cjk_schema's never-raises contract

2026-08-31 09:56:43 -07:00

test_gateway_streaming_nested_config.py

…

test_get_tool_definitions_cache_isolation.py

…

test_gitlock.py

test(gitlock): pin the git-process guard in sweep tests (deflake slice 8)

2026-08-16 06:29:53 -07:00

test_guest_durability_barriers.py

fix(state): guest durability barriers also apply configured database.synchronous

2026-08-27 13:48:51 -07:00

test_hermes_bootstrap.py

…

test_hermes_constants.py

test: pin that install-root siblings still get parent-dir hardening

2026-08-25 10:54:42 +10:00

test_hermes_home_profile_warning.py

…

test_hermes_logging.py

fix(cron): isolate desktop profile persistence

2026-08-31 07:28:22 -07:00

test_hermes_state_compression_busy_retry.py

fix(compression): watermark commit — appends flow freely, concurrent tail survives compaction

2026-08-15 23:37:22 -07:00

test_hermes_state_compression_locks.py

…

test_hermes_state_conn_lock_audit.py

test(state): AST lock audit — every self._conn call must hold self._lock

2026-08-31 09:56:04 -07:00

test_hermes_state_readonly_preflight.py

…

test_hermes_state_wal_fallback.py

…

test_hermes_state.py

fix(sessions): Desktop resume of a heavily-compacted chat no longer fails with 4130

2026-09-01 22:14:33 -07:00

test_hermetic_side_effect_guards.py

fix(tests): carry hermetic guards across the anthropic adapter module split

2026-08-29 18:34:35 -07:00

test_honcho_client_concurrency.py

…

test_honcho_client_config.py

fix(honcho): honor explicit top-level apiKey on local base_urls; warn on keyless profile host blocks

2026-08-13 23:43:15 +05:30

test_honcho_session_context.py

…

test_honcho_startup_fail_open.py

fix(honcho): honor writeFrequency in sync_turn by routing through manager.save()

2026-08-13 23:43:15 +05:30

test_install_autostash_conflict_recovery.py

…

test_install_clone_throttle_fallback.py

fix(install): defer the partial clone's checkout so the throttle fallback engages

2026-08-31 10:00:38 -07:00

test_install_commit_pin_rollback.py

…

test_install_diverged_update.py

…

test_install_lockfile_churn.py

…

test_install_macos_launcher.py

…

test_install_no_initial_commit.py

…

test_install_ps1_ascii_only.py

…

test_install_ps1_browser_install.py

fix(install): stop npm-installing agent-browser eagerly in install.sh/install.ps1

2026-08-13 02:38:28 -07:00

test_install_ps1_managed_node_swap.py

test: pin Test-Node managed-Node swap to same-directory renames

2026-08-14 21:35:30 -07:00

test_install_ps1_managed_python_provenance.py

test(installer): cover managed Python timeout

2026-09-01 09:28:01 -07:00

test_install_ps1_native_stderr_eap.py

fix(installer): preserve managed Python fallback version

2026-09-01 09:28:01 -07:00

test_install_ps1_node_path_for_npm.py

…

test_install_ps1_python_fallback_venv.py

…

test_install_ps1_resolver_strictmode.py

fix(install.ps1): initialize LastResolver before the resolved-path report

2026-08-23 18:27:21 -07:00

test_install_ps1_uv_install_fallback.py

fix(install.ps1): surface uv installer errors and add GitHub + existing-uv fallbacks (#69216)

2026-08-14 22:33:58 -07:00

test_install_ps1_uv_powershell_host.py

…

test_install_ps1_venv_process_tree.py

fix(installer): require Hermes-managed Python on Windows

2026-09-01 09:28:01 -07:00

test_install_ps1_venv_recreate_safety.py

fix(installer): preserve managed Python fallback version

2026-09-01 09:28:01 -07:00

test_install_ps1_venv_rename_abort.py

test(install): lock no in-place venv gut on rename failure

2026-08-14 21:58:09 -07:00

test_install_ps1_venv_transaction_boundary.py

fix(installer): hold the venv rollback source through dependency validation (#83149)

2026-08-14 21:58:09 -07:00

test_install_ps1_web_server_syntax_probe.py

…

test_install_scripts_computer_use.py

fix(computer-use): verify Windows driver repair

2026-08-16 11:34:40 -07:00

test_install_sh_acp_launcher.py

…

test_install_sh_bootstrap_marker.py

…

test_install_sh_browser_install.py

fix(install): stop npm-installing agent-browser eagerly in install.sh/install.ps1

2026-08-13 02:38:28 -07:00

test_install_sh_install_method_stamp.py

…

test_install_sh_node_deps_failure.py

fix(install): a failed Node dependency install now fails the install instead of printing success (#85537)

2026-08-13 18:39:54 +00:00

test_install_sh_node_deps_workspaces.py

test(install): pin the workspace selection away from apps/desktop

2026-08-31 10:00:55 -07:00

test_install_sh_node_global_prefix.py

…

test_install_sh_node_npm_check.py

fix(install): a failed Node dependency install now fails the install instead of printing success (#85537)

2026-08-13 18:39:54 +00:00

test_install_sh_node_prerelease.py

fix(install): never adopt a pre-release Node.js build

2026-08-31 10:53:18 -07:00

test_install_sh_node_probe_87460.py

test(install): repin #87460 probe tests on the line-walk contract

2026-08-31 10:53:18 -07:00

test_install_sh_pythonpath_sanitization.py

…

test_install_sh_root_fhs_uv_python_path.py

…

test_install_sh_setup_wizard_tty_probe.py

…

test_install_sh_symlink_stomp.py

…

test_install_sh_termux_network_prereqs.py

…

test_install_sh_termux_python_bounds.py

fix(install): provision supported Python from TUR on Termux and update docs

2026-09-01 11:25:10 -07:00

test_install_sh_uv_lock_config.py

fix(install): preserve project config for locked uv sync (#82446)

2026-08-28 12:36:15 -07:00

test_install_unmerged_index.py

test(install): lock no in-place venv gut on rename failure

2026-08-14 21:58:09 -07:00

test_ipv4_preference.py

…

test_iron_proxy_cli.py

…

test_iron_proxy_e2e.py

…

test_iron_proxy.py

…

test_journal_mode_config.py

fix(state): warn when configured journal_mode=delete is overridden by on-disk WAL

2026-08-27 07:52:26 -07:00

test_journal_mode_upgrade_warning.py

fix(state): warn when an existing database's journal_mode is flipped to WAL

2026-08-27 07:52:26 -07:00

test_lazy_secrets_dispatch.py

fix(test): make lazy-secrets update-check E2E tests network-independent

2026-08-17 02:40:59 -07:00

test_lazy_secrets_import.py

test(lazy-secrets): fix CI compatibility — run from repo root, avoid live-system guard

2026-08-15 01:55:22 -07:00

test_lazy_session_regressions.py

…

test_list_recent_user_messages_handoffs.py

…

test_live_system_guard_self_test.py

…

test_live_system_guard.py

…

test_log_isolation.py

…

test_managed_runtime_resolution.py

test: managed-runtime source scan survives a vanishing sdist dir (TOCTOU)

2026-09-01 10:52:42 -07:00

test_mcp_serve.py

feat(mcp): migrate to the mcp 2.x SDK

2026-08-16 23:26:10 -07:00

test_message_reactions.py

fix: stamp _db_persisted at row load time so resumed transcripts never re-append (#92231)

2026-08-23 13:34:32 +05:30

test_mini_swe_runner.py

…

test_minimax_model_validation.py

…

test_minimax_oauth.py

…

test_minisweagent_path.py

…

test_moa_prepared_request_leak_78382.py

fix(agent): strip _moa_prepared_request before dispatching to native client

2026-08-14 21:36:41 -07:00

test_model_forces_max_completion_tokens.py

…

test_model_picker_scroll.py

…

test_model_tools_async_bridge.py

…

test_model_tools.py

test: sweep sibling tests stale on the tool renames + deferral default

2026-08-29 18:23:07 -07:00

test_no_shadowed_test_definitions.py

…

test_ollama_num_ctx.py

fix(agent_init): clamp compressor window to Ollama num_ctx resolved after construction

2026-08-31 12:22:17 -07:00

test_onepassword_secrets.py

…

test_os_marker_gating.py

…

test_output_cap_parsing.py

fix(model-metadata): parse 'exceeds model maximum output tokens' cap errors

2026-08-20 11:37:01 +05:30

test_packaging_build_guard.py

fix(packaging): ship bundled plugin manifests

2026-08-14 21:45:08 -07:00

test_packaging_metadata.py

test(packaging): exempt every exact pin from exclude-newer — release-day brick class

2026-08-31 10:03:34 -07:00

test_plugin_skills.py

fix: support packaged memory provider skills

2026-08-13 11:49:14 -07:00

test_plugin_storage.py

feat(plugins): per-plugin durable data directory that survives plugin update and removal

2026-08-17 15:12:53 -05:00

test_plugin_utils.py

…

test_plugins_manage_profile_scope.py

fix(desktop): clean up Plugins settings — drop Example Plugin, hide bundled built-ins, add profile scoping

2026-08-17 16:39:47 -07:00

test_process_loop_event_loop_warning.py

…

test_profile_isolation_runtime.py

…

test_project_metadata.py

…

test_pty_keepalive_ws.py

fix(dashboard): redraw TUI after PTY reattach

2026-08-14 13:51:26 -07:00

test_pty_session.py

fix(dashboard): redraw TUI after PTY reattach

2026-08-14 13:51:26 -07:00

test_redaction_registry.py

…

test_resource_limits.py

…

test_retry_utils.py

…

test_run_tests_parallel_stdio.py

…

test_run_tests_parallel.py

…

test_sanitize_tool_error.py

…

test_schema_read_probe.py

…

test_search_slow_query_log.py

…

test_secret_scope_plugin_families.py

…

test_session_db_context_manager.py

docs(state): soften stale SessionDB self-pin wording after #88063

2026-08-16 20:43:13 -07:00

test_session_db_profile_stamp.py

fix(state): SessionDB derives its own store's profile for unstamped session rows

2026-08-31 05:56:18 -07:00

test_session_db_read_conn_pool.py

fix(state): cap read connections per PROCESS and yield when the fd table is tight

2026-08-31 11:23:48 -07:00

test_session_db_read_path_split.py

fix(state): isolate background reads from writer connection

2026-08-31 09:56:04 -07:00

test_session_delete_profile_isolation.py

fix(desktop): fail closed when messaging DELETE cannot resolve an owner

2026-08-25 23:15:49 -07:00

test_session_detail_malformed_db.py

fix(state-db): report corruption instead of "session not found", detect it early

2026-08-31 09:56:54 -07:00

test_session_skill_previews.py

fix(clients): hide compaction carriers across surfaces

2026-08-21 21:53:11 +05:30

test_session_system_prompt_dedup.py

…

test_session_vacuum_config.py

…

test_session_workspace_binding.py

…

test_slack_thread_require_mention.py

…

test_slash_worker_watchdog.py

…

test_sql_injection.py

…

test_sqlite_lock_safe_inspection.py

…

test_sqlite_wal_reset_gate.py

test(state): cover deferred FTS retry, leftover lock files, and WAL interpreter identity

2026-09-02 04:15:02 -07:00

test_stale_tool_call_marker_session_repair.py

…

test_stale_utils_module_import.py

…

test_state_db_malformed_repair.py

fix(state): decode errors now reach the heal path and fail loud in TUI (residual #98924 surfaces)

2026-08-31 09:56:43 -07:00

test_state_db_notadb_fail_closed.py

fix(state): quarantine SessionDB handle after structural corruption

2026-09-02 16:57:21 +05:30

test_state_db_repair_live_writer_guard.py

fix(state): scope salvage to repair-connection durability + live-writer guard

2026-08-22 04:02:29 +05:30

test_state_db_repair_loop_cap.py

fix(state): bound the state.db repair loop and stop dead-backup accumulation (#86747)

2026-08-15 02:22:58 -07:00

test_state_db_repair_loop_mtime.py

fix(state): split forensic-backup identity from repair-epoch fingerprint; publish backup bundle atomically

2026-08-22 14:33:20 +05:30

test_state_db_repair_non_destructive.py

fix(state): make automatic repair non-destructive

2026-08-23 18:25:12 -07:00

test_state_db_stats.py

fix(state): recover FTS after orphan holder deferrals

2026-08-23 20:01:41 -07:00

test_state_db_write_durability.py

fix(state): make automatic repair non-destructive

2026-08-23 18:25:12 -07:00

test_state_synchronous_pragma.py

docs(state): call the macOS synchronous rule a floor, not a pin

2026-08-27 07:52:26 -07:00

test_subprocess_home_isolation.py

…

test_telegram_polling_progress_ptb.py

…

test_termux_all_extra_compat.py

…

test_timezone.py

fix(timezone): make profile-keyed tz cache atomic and add cron persistence regression

2026-08-31 09:58:40 -07:00

test_tini_shim.py

…

test_toolset_distributions.py

…

test_toolsets.py

test: sweep sibling tests stale on the tool renames + deferral default

2026-08-29 18:23:07 -07:00

test_trajectory_compressor_async.py

…

test_trajectory_compressor.py

…

test_transform_api_error_classification_hook.py

chore: trim hook test suite to core coverage and condense hooks docs

2026-08-13 09:36:02 -07:00

test_transform_llm_output_hook.py

…

test_transform_tool_result_hook.py

…

test_tui_entry_mcp_owner.py

…

test_tui_gateway_event_replay.py

Revert "Merge pull request #94245 from kshitijk4poor/feat/gw-event-replay"

2026-08-27 11:26:57 +05:30

test_tui_gateway_loop_noise.py

…

test_tui_gateway_queue_on_busy.py

fix(tui): stop queued dispatch after session close

2026-08-16 06:26:37 -07:00

test_tui_gateway_server_crash_history.py

…

test_tui_gateway_server.py

fix(tui-gateway): adopt late compute-host compress acks instead of a false 120s timeout (#97948)

2026-09-02 01:35:59 -07:00

test_tui_gateway_ws.py

feat(gateway): add gateway.ping heartbeat wire contract

2026-08-24 04:01:53 -07:00

test_tui_mcp_late_refresh.py

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test_utils_atomic_roundtrip_yaml_save.py

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test_utils_truthy_values.py

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test_voice_max_recording_seconds.py

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test_wal_checkpoint_strategy.py

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test_web_server_sessiondb_eventloop.py

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test_web_server_status_topology_cache.py

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test_web_server.py

fix(dashboard): treat Ctrl+C serve shutdown as a clean exit (supersedes #52970) (#85711)

2026-08-14 12:02:05 -04:00

test_windows_subprocess_no_window_flags.py

test(browser): cover warm_agent_browser_npx_cache's hardened behavior

2026-08-13 02:38:28 -07:00

test_ws_keepalive_config.py

fix(gateway): make ws keepalive and orphan-reap grace config-driven (#79635)

2026-08-23 17:43:39 -07:00

test_yaml_indent_consistency_31999.py

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test_yuanbao_integration.py

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test_yuanbao_markdown.py

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test_yuanbao_pipeline.py

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test_yuanbao_proto.py

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test_yuanbao_reconnect_set_active.py

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test_yuanbao_shutdown.py

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test_zeroed_state_db.py

fix(state): reject special files in zeroed probe; real schema-bytes decode fixture

2026-08-31 09:56:43 -07:00